PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091348.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 430aa    MW: 46828.5 Da    PI: 9.815
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091348.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.7e-05203225223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp Cg+ F  ++nL+ H+ + H
  XP_010091348.1 203 SCPECGEIFMKPENLELHQVVkH 225
                     8*****************98777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280202225IPR007087Zinc finger, C2H2
PROSITE profilePS501579.016202230IPR007087Zinc finger, C2H2
SuperFamilySSF563995.28E-22227429No hitNo description
Gene3DG3DSA:3.90.228.101.2E-14228428IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MPSTMAKPRN QNKPTKKINQ SHKLEPQKAE KPPSWAVVRG LLTCKHSSQT QQQQNEDQNQ  60
KQKHKVQQKQ EQVLDETAKI KVKKMKCSGS LCSNTKVMHR PETGSPEVHK KRAISASSSS  120
SSSSTTNNET GSNRSIKAPL NELNGVVSTS TSSSSSFSVS SSTSGSFRGM PFRRFSGCYE  180
CRMVVDPVLG IARDPSLRGS ICSCPECGEI FMKPENLELH QVVKHAVSEL GPEDTSKNIV  240
EIIFQSSWLK KQAPVCKIDR ILKVHNTQKT ITKFEEYRDA IKAKATKLPK KNPRCVADGN  300
ELLRFHCATL RCSLGLKGSS NLCNSGPTCN ICSIIKNGFR VAGEPTGGGI LTTATSGKAH  360
DGVGGAGEDE ARAMLVCRVI AGRVKKSMEG ALEEYDSVAG AVGVYSNLDE LYVFNARAIL  420
PCFVVIYRGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091348.10.0hypothetical protein L484_020150
TrEMBLW9QN340.0W9QN34_9R
STRINGVIT_18s0001g03670.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84732128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-100C2H2-like zinc finger protein